Actually, there was no problem with the setting that I found. Just selected the little drop down and selected 4444.
Here is a summary of what I had considered "sort of" an issue.
1. The Dubon version doesn't do 4444 and I really like this one because of the interface directly in AE.
2. The Cinec one, DOES do 4444 but with a few large files I found some problems with it either locking up and not doing (or seeminly not) anything OR, it was stripping like 5-8 frames or so off the front and back so my video files were not matching right.
I was wondering if anyone else experienced that. Of course, now, I just bought version 2 which has an installer this time so maybe the whole thing is mute. I have not yet installed to check it out.
Eric